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Bug #3677
closedwhy default runMaxLikeAlignment.php to 1 ?
Status:
Closed
Priority:
Normal
Assignee:
Category:
-
Target version:
Start date:
10/19/2015
Due date:
% Done:
0%
Estimated time:
Affected Version:
Appion/Leginon 3.2
Show in known bugs:
No
Workaround:
Description
r19231 changes the stable branch to use one processor for maxlmum likelyhood alignment. Doesn't this take way too long to be a reasonable default ?
Updated by Neil Voss over 8 years ago
- Status changed from Assigned to Closed
- Assignee deleted (
Neil Voss) - Priority changed from Immediate to Normal
Updated by Anchi Cheng over 8 years ago
- Description updated (diff)
- Status changed from Closed to Assigned
- Assignee set to Neil Voss
What is your answer ?
Updated by Neil Voss over 8 years ago
I sent you a separate email last year, it was because of docker and I thought you reverted it, because it was still 4 in docker.
Updated by Neil Voss over 8 years ago
- Assignee changed from Neil Voss to Anchi Cheng
Hi Anchi, Can you revert this back to 4 in the myami 3.2 branch?
$nproc = ($_POST['nproc']) ? $_POST['nproc'] : '1';
Should be
$nproc = ($_POST['nproc']) ? $_POST['nproc'] : '4';
Not sure the best way to set the default, because it is cluster specific, but everywhere else this is the '4'.
Updated by Anchi Cheng over 8 years ago
Maybe the best is to default to None or empty string and add a validation and force users to think and set a reasonable value for their case. Not sure how to get it to interact with the process time estimate, though. What do you think ?
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