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Feature #4144
openuse Camera setup frame rotation to transform defects, references, and output in makeDEAlignedSum.py
Start date:
05/03/2016
Due date:
% Done:
0%
Estimated time:
Description
Needed when camera is rotated
Updated by Anchi Cheng over 8 years ago
- Status changed from Assigned to In Code Review
- Assignee changed from Anchi Cheng to Scott Stagg
- Priority changed from High to Normal
- Target version set to Appion/Leginon 3.3
r19714 adds the feature for rotation at 90 or 270 degrees.
r19715 cleans it up and add all rotations and pixels
Not doing flipping transforms.
Updated by Scott Stagg over 8 years ago
For reasons, I haven't figured out, this operation does not correctly fix bad rows and cols on my end. I added an option to override query of bad pix using command line options.
Updated by Anchi Cheng over 8 years ago
Scott.
We experience similar problem. The bad row or column sometimes offset by one. I can prove that the bad row and column are correctly identified when I read and correct it with the reader and algorithm used in makeDDRawFrameStack.py
r19772 replaces your
ax.tick_params(axis='both',bottom='off', left='off',top='off',right='off',labelbottom='off',labeltop='off',labelright='off', labelleft='off')
with the one that I can run without failing with the CentOS 6 yum installed 0.99 version of matplotlib. Hope that does not affect your side.
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