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Bug #5321
openOpenCV segmentation fault using Leginon RCT
Start date:
11/20/2017
Due date:
% Done:
0%
Estimated time:
Affected Version:
Appion/Leginon 3.2
Show in known bugs:
No
Workaround:
Description
Hi Anchi,
I was wondering if you have an insight on this problem. We keep getting segmentation faults whenever we use openCV. I created a new test file in leginon/testOpenCV.py to show the problem I am having.
#!/usr/bin/env python import sys import cv2 import numpy import platform print "system platform: ", platform.platform() print "openCV version: ", cv2.__version__ detector = cv2.FeatureDetector_create("SIFT") descriptor = cv2.DescriptorExtractor_create("BRIEF") matcher = cv2.DescriptorMatcher_create("BruteForce-Hamming") image1 = numpy.random.random((128,128)) kp1=detector.detect(image1) print "We did it, openCV is working, congrats to all"
When testing I always get a "Segmentation fault" with different versions and different systems.
CentOS 7:
system platform: Linux-3.10.0-514.10.2.el7.x86_64-x86_64-with-centos-7.4.1708-Core openCV version: 2.4.5 Segmentation fault
system platform: Linux-4.4.83-boot2docker-x86_64-with-centos-7.3.1611-Core openCV version: 2.4.5 Segmentation fault
Fedora 24:
system platform: Linux-4.11.12-100.fc24.x86_64-x86_64-with-fedora-24-Twenty_Four openCV version: 2.4.12.2 Segmentation fault (core dumped)
Debian 9:
system platform: Linux-3.16.0-4-amd64-x86_64-with-debian-8.9 openCV version: 2.4.9.1 Segmentation fault
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