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Bug #5640
closedproc2dLib read in the whole particle stack all the time
Start date:
03/27/2018
Due date:
% Done:
0%
Estimated time:
Affected Version:
Appion/Leginon 3.3
Show in known bugs:
Workaround:
Description
Line 407
indata = self.readFileData(self.params['infile'])
And then for Imagic file
Line 230
data = imagic.read(filename)
Updated by Anchi Cheng over 6 years ago
- Project changed from 138 to Appion
- Assignee set to Neil Voss
- Affected Version set to Appion/Leginon 3.3
Neil,
I don't need you to fix this right now if you don't have time, but I noticed this because a user here made a stack three times the size by mistake and ran into memory issue reading the file and let me to this. I just wonder if this is the source of proc2dLib "known to have out of memory issues". The user was running maxlikealignment.py
Updated by Anchi Cheng over 6 years ago
- Status changed from Assigned to Won't Fix or Won't Do
- Assignee changed from Neil Voss to Anchi Cheng
Never mind. Her problem is that the file does not actually has the right size even though the header says so.
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