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Test Case #924

open

test makegoodaverage,php

Added by Amber Herold about 14 years ago. Updated almost 14 years ago.

Status:
Fail
Priority:
Low
Assignee:
-
Category:
-
Target version:
Appion Test Suite
Start date:
10/13/2010
Due date:
10/15/2010 (over 14 years late)
% Done:

0%

Estimated time:

Description

Be sure to run the version indicated by the Target Version field of this test case.

Please ensure the user guide page for this feature is correct/complete.

If it fails, set the status of this test case to fail. Create a new issue with details of the bug and link the bug to this test case as a related issue.
If it passes, set the status of this test case to pass.

Related issues 1 (1 open — 0 closed)

Related to Appion - Bug #947: makegoodaverage.php needs a better defualt value for avgjump and error checkingNew10/15/2010

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 #1

Updated by Arne Moeller about 14 years ago

  • Status changed from Untested to Fail
  • Assignee changed from Arne Moeller to Amber Herold

I good this error message:

!!! WARNING: EMAN failed with subprocess error code 1
EMAN: proc3d /ami/data00/appion/10sep01b/recon/emanrecon4/eulers/refine4_10oct14o45/threed.
... /threed.mrc mask=100 norm
Traceback (most recent call last):
File "/opt/appion/bin/makegoodaverages.py", line 429, in ?
makegood.start()
File "/opt/appion/bin/makegoodaverages.py", line 380, in start
apEMAN.make3d(self.params['oddstack'],"odd.mrc", sym=self.params['sym'],mode=self.params['mode'],hard=self.params['hard'])

KeyError: 'oddstack'

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 #2

Updated by Amber Herold about 14 years ago

  • Assignee deleted (Amber Herold)
  • Target version changed from Appion/Leginon 2.1.0 to Appion Test Suite
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 #3

Updated by Amber Herold almost 14 years ago

  • Priority changed from High to Low
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