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Feature #9353

open

reduce leginon image data folder size after pre-processing

Added by Anchi Cheng about 4 years ago. Updated about 4 years ago.

Status:
Assigned
Priority:
Normal
Assignee:
-
Category:
-
Target version:
Leginon - Appion/Leginon 3.5
Start date:
08/31/2020
Due date:
% Done:

0%

Estimated time:

Description

After frame alignment and ctf estimation, unaligned image and non-dose-weighted image are not useful but take up a full mrc file space. This reduces its footprint by shrinking unaligned image to 8x8 statistically correct array and make aligned image a soft link.

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 #1

Updated by Anchi Cheng about 4 years ago

Usage: python image_folder_shrink.py <your leginon rawdata folder>

Requirement: python, pyami and numpy

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