Appion Manual » History » Revision 26
Revision 25 (Amber Herold, 05/12/2010 10:37 AM) → Revision 26/33 (Amber Herold, 05/12/2010 10:39 AM)
h1. Appion Manual # *[[An Introduction to Appion]]* ## [[What is Appion?]] ## [[System Requirements]] ## [[Authors]] # *[[Complete Installation]]* ## [[Instructions for installing CentOS on your computer]] ## [[Download additional Software]] ## [[Database Server Installation]] ## [[Processing Server Installation]] ## [[Web Server Installation]] ## [[Create a Test Project]] ## [[Setup Remote Processing]] # *[[Upgrade Instructions]]* # *[[Appion User Guide]]* ## [[Appion and Leginon Database Tools]] ### [[Administration]] #### [[Groups]] #### [[Users]] #### [[Instruments]] #### [[Default Settings]] #### [[Calibrations]] #### [[Applications]] #### [[Goniometer]] ### [[User Management]] #### [[Enable User Authentication]] #### [[New User Registration]] #### [[Retrieve Forgotten Password]] #### [[Modify Your Profile]] #### [[Logout]] ### [[Project DB]] #### [[View Projects]] #### [[Create New Project]] #### [[Edit Project Description]] #### [[Edit Project Owners]] #### [[Create a Project Processing Database]] #### [[Unlink a Project Processing Database]] #### [[Upload Images to a new Project Session]] #### [[Share a Project Session with another User]] #### [[View a Summary of a Project Session]] #### [[Grid Management]] ### [[Image Viewers]] #### [[Common Features]] #### [[Image Tools]] #### [[Image Viewer]] #### [[2 Way Viewer]] #### [[3 Way Viewer]] #### [[Dual Viewer]] ### [[LOI - Leginon Observer Interface]] ### [[RCT]] ### [[Tomography]] ### [[Hole Template Viewer]] ## [[Appion Processing]] ### [[Terminology]] ### [[Common Workflow]] ### [[Processing Cluster Login]] ### [[Particle Selection]] #### [[Template Picking]] #### [[Dog Picking]] #### [[Manual Picking]] ### [[CTF Estimation]] #### [[Ace Estimation]] #### [[Ace 2 Estimation]] #### [[CtfTilt Estimation]] ### [[Import Tools]] #### [[PDB tp Model]] #### [[EMDB to Model]] #### [[Upload Particles]] #### [[Upload Template]] #### [[Upload Model]] #### [[Upload More Images]] #### [[Upload Stack]] ### [[Image Assessment]] #### [[Web Img Assessment]] #### [[Multi Img Assessment]] #### [[Run Image Rejector]] ### [[Region Mask Creation]] #### [[Crud Finding]] #### [[Manual Masking]]