Appion Processing » History » Revision 19
Revision 18 (Anke Mulder, 06/03/2010 06:52 PM) → Revision 19/69 (Anke Mulder, 06/03/2010 07:01 PM)
h1. Appion Processing !http://emg.nysbc.org/attachments/277/Picture_81.png! ## [[Terminology]] ## [[Common Workflow]] ### [[Step by Step Guide]] ### [[Quality Assessment]] ## [[Processing Cluster Login]] ## [[Particle Selection]] (Arne) ### [[Template Picking]] ### [[Dog Picking]] ### [[Manual Picking]] ### [[Repeat from other session]] ### [[Align and Edit Tilt Pairs]] ### [[Auto Align Tilt Pairs]] ## [[CTF Estimation]] (Anke) ### [[Ace Estimation]] ### [[Ace 2 Estimation]] ### [[CtfFind Estimation]] ### [[Repeat from other session]] ## [[Stacks]] (Arne) ### [[Stack creation]] ### [[more stack tools]] ## [[Particle Alignment]] (Anke) ### [[Run Alignment]] ### [[Run Feature Analysis]] ### [[Run Particle Clustering]] ## [[Ab Initio Reconstruction]] ### [[RCT Volume]] (Anke) ### [[OTR Volume]] (PickWei) ### [[EMAN Common Lines]] (Dmitry) ### [[IMAGIC Angular Reconstitution]] ## [[Refine Reconstruction]] (Dmitry) ### [[EMAN Refinement]] ### [[Frealign Refinement]] ## [[Tomography]] ### [[Align tilt series]] ### [[Create full tomogram]] ### [[Upload tomogram]] ### [[Create tomogram subvolume]] ### [[Average subvolumes]] ## [[Import Tools]] (PickWei) ### [[PDB to Model]] ### [[EMDB to Model]] ### [[Upload Particles]] ### [[Upload Template]] ### [[Upload Model]] ### [[Upload More Images]] ### [[Upload Stack]] ## [[Image Assessment]] (PickWei) ### [[Web Img Assessment]] ### [[Multi Img Assessment]] ### [[Run Image Rejector]] ## [[Region Mask Creation]](PickWei) ### [[Crud Finding]] ### [[Manual Masking]] ## [[Synthetic Data]] (Dmitry) ### [[Synthetic Dataset Creation]] !http://emg.nysbc.org/attachments/277/Picture_81.png! ______ [[Appion and Leginon Database Tools|< Appion and Leginon Database Tools]] ______