Appion Processing » History » Revision 22
Revision 21 (Anchi Cheng, 06/03/2010 09:39 PM) → Revision 22/69 (Anke Mulder, 06/04/2010 09:56 AM)
h1. Appion Processing ## [[Terminology]] ## [[Common Workflow]] ### [[Step by Step Guide]] ### [[Quality Assessment]] ## [[Processing Cluster Login]] ## [[Particle Selection]] ### [[Template Picking]] ### [[Dog Picking]] ### [[Manual Picking]] ### [[Repeat from other session]] ### [[Align and Edit Tilt Pairs]] ### [[Auto Align Tilt Pairs]] ## [[CTF Estimation]] ### [[Ace Estimation]] ### [[Ace 2 Estimation]] ### [[CtfFind Estimation]] ### [[Repeat from other session]] ## [[Stacks]] ### [[Stack creation]] ### [[more stack tools]] ## [[Particle Alignment]] ### [[Run Alignment]] ### [[Run Feature Analysis]] ### [[Run Particle Clustering]] ## [[Ab Initio Reconstruction]] ### [[RCT Volume]] ### [[OTR Volume]] ### [[EMAN Common Lines]] ### [[IMAGIC Angular Reconstitution]] ## [[Refine Reconstruction]] ### [[EMAN Refinement]] ### [[Frealign Refinement]] ## [[Tomography]] ### [[Align tilt series]] ### [[Create full tomogram]] ### [[Upload tomogram]] ### [[Create tomogram subvolume]] ### [[Average subvolumes]] ## [[Import Tools]] ### [[PDB to Model]] ### [[EMDB to Model]] ### [[Upload Particles]] ### [[Upload Template]] ### [[Upload Model]] ### [[Upload More Images]] ### [[Upload Stack]] ## [[Image Assessment]] ### [[Web Img Assessment]] ### [[Multi Img Assessment]] ### [[Run Image Rejector]] ## [[Region Mask Creation]] ### [[Manual Masking]] ## [[Synthetic Data]] ### [[Synthetic Dataset Creation]] h2. Notes, Comments, and Suggestions: !http://emg.nysbc.org/attachments/277/Picture_81.png! !http://emg.nysbc.org/attachments/282/Picture_83.png! !http://emg.nysbc.org/attachments/277/Picture_81.png! ______ [[Appion and Leginon Database Tools|< Appion and Leginon Database Tools]] ______