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Appion Processing » History » Revision 3

Revision 2 (Amber Herold, 04/22/2010 08:24 AM) → Revision 3/69 (Anke Mulder, 05/11/2010 10:54 AM)

h1. Appion Processing 

 ## [[Terminology]] 
 ## [[Common Workflow]] 
 ## [[Processing Cluster Login]] 
 ## [[Particle Selection]] 
 ### [[Template Picking]] 
 ### [[Dog Picking]] 
 ### [[Signature]] 
 ### [[Manual Picking]]  
 ### [[Repeat from other session]] 
 ### [[Align and Edit Tilt Pairs]] 
 ### [[Auto Align Tilt Pairs]] 
 ## [[CTF Estimation]] 
 ### [[Ace Estimation]] 
 ### [[Ace 2 Estimation]] 
 ### [[CtfTilt Estimation]] 
 ### [[Repeat from other session]] 
 ## [[Stacks]] 
 ### [[Stack creation]] 
 ### [[more stack tools]] 
 ## [[Particle Alignment]] 
 ### [[Run Alignment]] 
 ### [[Run Feature Analysis]] 
 ### [[Run Particle Clustering]] 
 ## [[Ab Initio Reconstruction]] 
 ### [[RCT Volume]] 
 ### [[OTR Volume]] 
 ### [[EMAN Common Lines]] 
 ### [[IMAGIC Angular Reconstitution]] 
 ## [[Refine Reconstruction]] 
 ### [[EMAN Refinement]] 
 ## [[Import Tools]] 
 ### [[PDB tp Model]] 
 ### [[EMDB to Model]] 
 ### [[Upload Particles]] 
 ### [[Upload Template]] 
 ### [[Upload Model]] 
 ### [[Upload More Images]] 
 ### [[Upload Stack]] 
 ## [[Image Assessment]] 
 ### [[Web Img Assessment]] 
 ### [[Multi Img Assessment]] 
 ### [[Run Image Rejector]] 
 ## [[Region Mask Creation]] 
 ### [[Crud Finding]] 
 ### [[Manual Masking]]  
 ## [[Synthetic Data]] 
 ### [[Synthetic Dataset Creation]] 
  

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 [[Appion and Leginon Database Tools|< Appion and Leginon Database Tools]] 

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