Appion citations » History » Revision 3
Revision 2 (Amber Herold, 11/10/2010 11:04 AM) → Revision 3/29 (Amber Herold, 11/10/2010 11:07 AM)
h1. Appion citations
Appion includes software from the following packages:
$title, $year, $authorlist, $journal, $volume=false, $issue=false, $pmid=false, $pmcid=false, $doi=false, $logo=false
h3. EMAN
EMAN: semiautomated software for high-resolution single-particle reconstructions.", 1999, "Ludtke SJ, Baldwin PR, Chiu W.", "J Struct Biol.", 128, 1, 10600563, false, false, "img/eman_logo.png");
h3. SPIDER
SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields.", 1996, "Frank J, Radermacher M, Penczek P, Zhu J, Li Y, Ladjadj M, Leith A.", "J Struct Biol.", 116, 1, 8742743, false, false, "img/spider_logo.png");
h3. IMAGIC
"A New Generation of the IMAGIC Image Processing System.", 1996, "van Heel M., Harauz G., Orlova E. V., Schmidt R. & Schatz M", "J Struct Biol", 116, 1, 8742718, false, false, "img/imagic_logo.png");
h3. Appion
"Appion: an integrated, database-driven pipeline to facilitate EM image processing.", 2009, "Lander GC, Stagg SM, Voss NR, <i>et al.</i>", "J Struct Biol.", 166, 1, 19263523, 2775544, "10.1016/j.jsb.2009.01.002", "img/topbarbackgrnd.jpg");
h3. Frealign
FREALIGN: high-resolution refinement of single particle structures.", 2007, "Grigorieff, N.", "J Struct Biol.", 157, 1, 16828314, false, "10.1016/j.jsb.2006.05.004", "img/grigorieff_lab.png");
h3. Initial Model
A toolbox for ab initio 3-D reconstructions in single-particle electron microscopy.", 2010, "Voss NR, Lyumkis D, Cheng A, <i>et al.</i>", "J Struct Biol.", 169, 3, 20018246, false, false, "img/topbarbackgrnd.jpg");
h3. Dog Picking
"DoG Picker and TiltPicker: software tools to facilitate particle selection in single particle electron microscopy." (2009) Voss NR, Yoshioka CK, Radermacher M, Potter CS, Carragher B. J Struct Biol. v166(2). PMID: 19374019 Free text: PMC2768396