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Configure appioncfg shared » History » Version 10

Sargis Dallakyan, 10/30/2013 12:29 PM
see http://emg.nysbc.org/boards/15/topics/1791

1 1 Amber Herold
h1. Configure .appion.cfg
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3 7 Anchi Cheng
# Create a hidden file called .appion.cfg in the myami directory, at one level above appionlib as the configuration for all users
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For example, from python command prompt
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<pre>
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import appionlib
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appionlib
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</pre>
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gives
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<pre>
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<module 'appionlib' from '/usr/lib/python26/site-packages/appionlib/__init__.pyc'>
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</pre>
13 8 Anchi Cheng
then the path where appion looks for this global configuration file is
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<pre>
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/usr/lib/python26/.appion.cfg
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</pre>
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*Note:* This file may be added to a users home directory on the processing host to override the configuration found in the installation directory. 
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&nbsp;
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# Add the following contents:
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<pre>
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ProcessingHostType=Torque
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Shell=/bin/csh
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ScriptPrefix=
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ExecCommand=/usr/local/bin/qsub
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StatusCommand=/usr/local/bin/qstat
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AdditionalHeaders= -m e, -j oe
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PreExecuteLines=
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</pre>
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# Modify the settings for your Processing Host