Filter by MeanStdev » History » Version 2
Anke Mulder, 06/07/2010 05:45 PM
| 1 | 1 | Anke Mulder | h1. Filter by MeanStdev |
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| 3 | Filter particle stack by mean and stdev values. |
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| 4 | 2 | Anke Mulder | !http://emg.nysbc.org/attachments/277/Picture_81.png! |
| 5 | 1 | Anke Mulder | |
| 6 | h2. General Workflow: |
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| 8 | # Check run name, output directory location, and write a description for this filtering run. |
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| 9 | # Input min and max values for the x-axis (mean particle intensity) and the y-axis (stdev). |
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| 10 | # Click "Test selected points" to refresh the graph with a trapezoid that defines the particles to keep. |
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| 11 | !http://emg.nysbc.org/attachments/321/Picture_54.png! |
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| 12 | 2 | Anke Mulder | # Check the resulting trapezoid and repeat steps 2-3 until satisfied. |
| 13 | # Click "Create SubStack" to submit to the cluster. Alternatively, click "Just Show Command" to obtain a command that can be copied and pasted into a unix shell. |
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| 15 | 1 | Anke Mulder | |
| 16 | h2. Notes, Comments, and Suggestions: |