Install Appion Packages » History » Revision 30
Revision 29 (Anchi Cheng, 03/04/2011 03:08 PM) → Revision 30/41 (Amber Herold, 04/28/2011 08:57 AM)
h1. Install Appion Packages h3. Install the appion python package The pysetup.py script above did not install the appion package. Since the appion package includes many executable scripts, it is important that you know where they are being installed. To prevent cluttering up the /usr/bin directory, you can specify an alternative path, typically /usr/local/bin, or a directory of your choice that you will later add to your PATH environment variable. Install appion like this: <pre> cd /path/to/myami-VERSION/appion appion sudo python setup.py install --install-scripts=/usr/local/bin </pre> h3. Install all the myami python packages _except appion_ using the following script: {{include(appion:Install Appion Packages Shared)}} Finally, you will need to set the the MATLABPATH environment variable in order to get the Appion utilities that use Matlab to work. For bash: <pre> export MATLABPATH=$MATLABPATH:<your_appion_directory>/ace </pre> or C shell <pre> setenv MATLABPATH $MATLABPATH:<your_appion_directory>/ace </pre> ______ [[Perform system check|< Perform system check]] | [[Configure leginon.cfg|Configure leginon.cfg >]] ______