Appion

h1. Install Appion Packages

h2. Install the appion python package

Since the appion package includes many executable scripts, it is important that you know where they are being installed.  To prevent cluttering up the /usr/bin directory, you can specify an alternative path, typically /usr/local/bin, or a directory of your choice that you will later add to your PATH environment variable.  Install appion like this:

<pre>

cd /path/to/myami-VERSION/appion

sudo python setup.py install --install-scripts=/usr/local/bin/appion

</pre>

h2. Install all the myami python packages _except appion_ using the following script:

{{include(appion:Install Appion Packages Shared)}}

h2. Set additional appion environment variables

Finally, you will need to set the the MATLABPATH environment variable in order to get the Appion utilities that use Matlab to work.

For bash:

<pre>

export MATLABPATH=$MATLABPATH:<your_appion_directory>/ace

</pre>

or C shell

<pre>

setenv MATLABPATH $MATLABPATH:<your_appion_directory>/ace

</pre>

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[[Perform system check|< Perform system check]] | [[Configure leginon.cfg|Configure leginon.cfg >]]

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