Install Appion Packages » History » Version 33
  Amber Herold, 11/20/2013 03:31 PM 
  
| 1 | 28 | Anchi Cheng | h1. Install Appion Packages  | 
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| 3 | 32 | Anchi Cheng | h2. Install the appion python package  | 
| 4 | 28 | Anchi Cheng | |
| 5 | 30 | Amber Herold | Since the appion package includes many executable scripts, it is important that you know where they are being installed. To prevent cluttering up the /usr/bin directory, you can specify an alternative path, typically /usr/local/bin, or a directory of your choice that you will later add to your PATH environment variable. Install appion like this:  | 
| 6 | 28 | Anchi Cheng | <pre>  | 
| 7 | 30 | Amber Herold | cd /path/to/myami-VERSION/appion  | 
| 8 | 31 | Anchi Cheng | sudo python setup.py install --install-scripts=/usr/local/bin/appion  | 
| 9 | 28 | Anchi Cheng | </pre>  | 
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| 11 | 32 | Anchi Cheng | h2. Install all the myami python packages _except appion_ using the following script:  | 
| 12 | 1 | Amber Herold | |
| 13 | {{include(appion:Install Appion Packages Shared)}} | 
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| 14 | 32 | Anchi Cheng | |
| 15 | h2. Set additional appion environment variables  | 
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| 16 | 28 | Anchi Cheng | |
| 17 | Finally, you will need to set the the MATLABPATH environment variable in order to get the Appion utilities that use Matlab to work.  | 
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| 18 | For bash:  | 
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| 19 | <pre>  | 
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| 20 | export MATLABPATH=$MATLABPATH:<your_appion_directory>/ace  | 
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| 21 | </pre>  | 
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| 22 | or C shell  | 
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| 23 | <pre>  | 
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| 24 | setenv MATLABPATH $MATLABPATH:<your_appion_directory>/ace  | 
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| 25 | </pre>  | 
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| 26 | 2 | Amber Herold | |
| 27 | ______  | 
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| 28 | |||
| 29 | 33 | Amber Herold | [[Perform system check|< Perform system check]] | [[Perform system check|Perform system check >]]  | 
| 30 | 1 | Amber Herold | ______  |