Install Appion Packages » History » Version 34
Amber Herold, 11/20/2013 03:32 PM
1 | 28 | Anchi Cheng | h1. Install Appion Packages |
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3 | 32 | Anchi Cheng | h2. Install the appion python package |
4 | 28 | Anchi Cheng | |
5 | 30 | Amber Herold | Since the appion package includes many executable scripts, it is important that you know where they are being installed. To prevent cluttering up the /usr/bin directory, you can specify an alternative path, typically /usr/local/bin, or a directory of your choice that you will later add to your PATH environment variable. Install appion like this: |
6 | 28 | Anchi Cheng | <pre> |
7 | 30 | Amber Herold | cd /path/to/myami-VERSION/appion |
8 | 31 | Anchi Cheng | sudo python setup.py install --install-scripts=/usr/local/bin/appion |
9 | 28 | Anchi Cheng | </pre> |
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11 | 32 | Anchi Cheng | h2. Install all the myami python packages _except appion_ using the following script: |
12 | 1 | Amber Herold | |
13 | {{include(appion:Install Appion Packages Shared)}} |
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15 | h2. Set additional appion environment variables |
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16 | 28 | Anchi Cheng | |
17 | Finally, you will need to set the the MATLABPATH environment variable in order to get the Appion utilities that use Matlab to work. |
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18 | For bash: |
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19 | <pre> |
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20 | export MATLABPATH=$MATLABPATH:<your_appion_directory>/ace |
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21 | </pre> |
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22 | or C shell |
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23 | <pre> |
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24 | setenv MATLABPATH $MATLABPATH:<your_appion_directory>/ace |
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25 | </pre> |
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26 | 2 | Amber Herold | |
27 | ______ |
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29 | 34 | Amber Herold | [[Download Appion Files|< Download Appion/Leginon Files]] | [[Perform system check|Perform system check >]] |
30 | 1 | Amber Herold | ______ |