Project

General

Profile

Install Appion Packages » History » Revision 40

Revision 39 (Carl Negro, 09/10/2015 02:26 PM) → Revision 40/41 (Anchi Cheng, 01/30/2018 10:19 PM)

h1. Install Appion Packages 

 h2. Install the appion python package 

 {{include(Install_Appion_bin_shared)}} 

 h2. (Optional) Install the dbschema python package 

 {{include(Install_Appion_bin_shared)}} 
 [[install_dbschema_shared]] 

 h2. Install all the myami python packages _except appion_ using the following script: 

 {{include(appion:Install Appion Packages Shared)}} 


 h3. Check permissions 

 Verify that all users have executable permission for rctacquisition.py. It may be necessary to run: 

 <pre> 
 chmod 755 ./leginon/rctacquisition.py 
 </pre> 

 h2. Set additional appion environment variables 

 Finally, you will need to set the the MATLABPATH environment variable in order to get the Appion utilities that use Matlab to work. 
 For bash: 
 <pre> 
 export MATLABPATH=$MATLABPATH:<your_appion_directory>/ace 
 </pre> 
 or C shell 
 <pre> 
 setenv MATLABPATH $MATLABPATH:<your_appion_directory>/ace 
 </pre> 

 ______ 


 [[Download Appion Files|< Download Appion/Leginon Files]] | [[Perform system check|Perform system check >]] 

 ______