Install EMAN » History » Revision 13
Revision 12 (Neil Voss, 05/13/2010 08:42 AM) → Revision 13/21 (Neil Voss, 05/13/2010 08:55 AM)
h1. Install EMAN EMAN1 is a fundamental package used in appion for general file conversion and image filtering. h2. Download latest EMAN1 (not EMAN2) binaries (currently version 1.9): # Go to the "EMAN webpage":http://blake.bcm.tmc.edu/eman/ # Click on @(download)@ next to @EMAN1@ # Scroll to Download 1.9 # Click on @Download 1.9@ link # Select the appropriate package #* we recommend using the @cluster@ version of EMAN1 #* x86 for 32bit and x86_64 for 64bit machines #* In this case, we would download the "eman-linux-x86_64-cluster-1.9.tar.gz" h2. Install EMAN # Go to download directory and unzip the tar file: <pre>tar -zxvf eman-linux-x86_64-cluster-1.9.tar.gz</pre> # Move the unzipped folder to a global location <pre>sudo mv -v EMAN /usr/local/</pre> # Run the EMAN installer, it sets up the EMAN python module (must be run from the EMAN directory) <pre> cd /usr/local/EMAN/ ./eman-installer </pre> h2. # Set enivromental variables #* For @BASH@, create an eman.sh and add the following lines: <pre> export EMANDIR=/usr/local/EMAN export PATH=${EMANDIR}/bin:${PATH} export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${EMANDIR}/lib export PYTHONPATH=${EMANDIR}/lib </pre> #* For @C@ shell, create an eman.csh and add the following lines: <pre> setenv EMANDIR /usr/local/EMAN setenv PATH ${EMANDIR}/bin:${PATH} setenv LD_LIBRARY_PATH ${EMANDIR}/lib setenv PYTHONPATH ${EMANDIR}/lib </pre> #* And then add it to the global /etc/profile.d/ folder <pre> sudo cp -v eman.sh /etc/profile.d/eman.sh sudo chmod 755 /etc/profile.d/eman.sh sudo cp -v eman.csh /etc/profile.d/eman.csh sudo chmod 755 /etc/profile.d/eman.csh </pre> h2. Test EMAN install Run @proc2d@ <pre>proc2d help</pre> Should popup a window displaying help for proc2d ______ [[Install External Packages|< Install External Packages]] | [[Install SPIDER|Install SPIDER >]] ______