Install Grigorieff lab software » History » Version 12
Amber Herold, 02/25/2011 01:26 PM
| 1 | 1 | Neil Voss | h1. Install Grigorieff lab software |
|---|---|---|---|
| 2 | |||
| 3 | 7 | Neil Voss | The Grigorieff lab at Brandies provides several individual programs that are used in Appion. See their "main software page":http://emlab.rose2.brandeis.edu/software to download their software |
| 4 | 2 | Neil Voss | |
| 5 | h2. Software used in Appion: |
||
| 6 | |||
| 7 | 8 | Neil Voss | * "Frealign":http://emlab.rose2.brandeis.edu/frealign — Refinement of 3D reconstructions using single-particle images |
| 8 | 10 | Neil Voss | * "CTFfind and CTFtilt":http://emlab.rose2.brandeis.edu/ctf — CTF estimation |
| 9 | 12 | Amber Herold | ** NOTE: Once installed, you must rename ctffind3.exe to ctffind64.exe and ctftilt.exe to ctftilt64.exe or create symbolic links or you will recieve an error that ctffind64.exe was not found during ctf estimation. |
| 10 | 10 | Neil Voss | * "Signature":http://emlab.rose2.brandeis.edu/signature — Particle selection from micrographs |
| 11 | * "Rmeasure":http://emlab.rose2.brandeis.edu/rmeasure — Resolution measurement |
||
| 12 | 11 | Amber Herold | |
| 13 | 1 | Neil Voss | ______ |
| 14 | |||
| 15 | [[Install UCSF Chimera|< Install UCSF Chimera]] | [[Compile FindEM|Compile FindEM >]] |
||
| 16 | |||
| 17 | ______ |