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Install Grigorieff lab software » History » Revision 14

Revision 13 (Amber Herold, 02/25/2011 01:26 PM) → Revision 14/18 (Amber Herold, 02/25/2011 01:27 PM)

h1. Install Grigorieff lab software 

 The Grigorieff lab at Brandies provides several individual programs that are used in Appion. See their "main software page":http://emlab.rose2.brandeis.edu/software to download their software 

 h2. Software used in Appion: 

 * "Frealign":http://emlab.rose2.brandeis.edu/frealign — Refinement of 3D reconstructions using single-particle images 
 * "CTFfind and CTFtilt":http://emlab.rose2.brandeis.edu/ctf — CTF estimation 
 ** *NOTE:* Once installed, you must rename ctffind3.exe to ctffind64.exe and ctftilt.exe to ctftilt64.exe or create symbolic links. Otherwise, links or you will receive recieve an error that ctffind64.exe was not found during ctf estimation. 
 * "Signature":http://emlab.rose2.brandeis.edu/signature — Particle selection from micrographs 
 * "Rmeasure":http://emlab.rose2.brandeis.edu/rmeasure — Resolution measurement 

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 [[Install UCSF Chimera|< Install UCSF Chimera]] | [[Compile FindEM|Compile FindEM >]] 

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