PDB tp Model » History » Revision 3
Revision 2 (Pick-Wei Lau, 05/17/2010 10:48 AM) → Revision 3/5 (Pick-Wei Lau, 05/17/2010 10:48 AM)
h1. PDB tp Model The user is able to retrieve pdb models from the Protein Data Bank and generate a 3D density volume from the atomic model. h2. To launch: # The user enters the PDB ID (and check on the "use biological unit" check box if desired) # The user decides the resolution of the density model (typically filter to 15 - 25 Angstrom resolution) # The user selects the symmetry of the model # The user selects the pixel size for the model # The user selects the box size. Note: the user needs to make sure that the box size is sufficiently large to accommodate the 3D volume to be generated. h2. Output: # Once the model is generated, it will be deposited under "3d Density Volumes" ______ [[Import Tools|< Import Tools]] | [[EMDB to Model|EMDB to Model >]] ______