Sort Junk » History » Version 6
Anke Mulder, 06/07/2010 06:10 PM
| 1 | 1 | Anke Mulder | h1. Sort Junk |
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| 3 | 5 | Anke Mulder | Xmipp Sort by Statistics: This function sorts the particles in a stack by how closely they resemble the average. In general, this will sort the particles by how likely that they are junk. After sorting the particles a new stack will be created, you will then have to select at which point the junk starts and Apply junk cutoff. The second function, Apply junk cutoff will then create a third stack with no junk in it. |
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| 5 | 6 | Anke Mulder | !http://emg.nysbc.org/attachments/325/Picture_61.png! |
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| 7 | 2 | Anke Mulder | h2. General Workflow: |
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| 9 | 4 | Anke Mulder | # Check run name and enter a description. |
| 10 | # Make sure the "Commit to Database" box is checked if appropriate. Click "SortJunk" to submit to the cluster. Alternatively, click "Just Show Command" in order to copy and paste into a unix shell. |
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| 12 | !http://emg.nysbc.org/attachments/324/Picture_59.png! |
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| 14 | 2 | Anke Mulder | h2. Notes, Comments, and Suggestions: |
| 15 | 1 | Anke Mulder | |
| 16 | !http://emg.nysbc.org/attachments/277/Picture_81.png! |
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| 17 | 3 | Anke Mulder | |
| 18 | [[Center Particles|< Center Particles]] | [[Create Substack|Create Substack >]] |