Appion

Test Appion Shared » History » Revision 6

Revision 5 (Amber Herold, 04/28/2011 09:28 AM) → Revision 6/7 (Amber Herold, 04/28/2011 09:28 AM)

h2. Test Appion 

 * If appion was installed using @setup.py@ you are ready to test out appion. 

 * Run the following script to test import of Appion libraries and binaries: 
 <pre> 
 cd myami/appion/ 
 ./check.sh 
 </pre> 
 *NOTE* 
 You can ignore EMAN, MATLAB, and UCSF Chimera errors at this point. 
 &nbsp; 
 What about: raise LeginonConfigError('set IMAGE_PATH in leginonconfig.py') 
 leginon.leginonconfig.LeginonConfigError: set IMAGE_PATH in leginonconfig.py 

 >You need to [[Configure_leginoncfg|edit leginon.cfg]]. 

 * Run the following script to test the installation of 3rd party processing packages: 
 <pre> 
 cd myami/appion/test 
 python check3rdPartyPackages.py 
 </pre> 
 > Note: check3rdPartyPackages.py is currently only available with development svn checkout, will be included in version 2.2 
 &nbsp; 
 <pre> 
 cd myami/appion/test 
 python check3rdPartyPackages.py 
 </pre>