Tomography » History » Version 20
Alex Noble, 11/10/2015 12:56 PM
| 1 | 1 | Amber Herold | h1. Tomography |
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| 2 | |||
| 3 | 3 | Anke Mulder | This section contains the step-by-step procedures for calculating tomograms. |
| 4 | 2 | Anke Mulder | |
| 5 | 16 | Anchi Cheng | h2. Warning: These processing are designed for Leginon acquired-tilt series only. Uploaded tilt series does not work |
| 6 | |||
| 7 | 3 | Anke Mulder | h2. General Workflow: |
| 8 | 1 | Amber Herold | |
| 9 | 19 | Alex Noble | # [[Align Tilt Series|Auto align+reconstruction]] |
| 10 | # [[Align Tilt-Series|Align Tilt-Series (Appion-Protomo)]] |
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| 11 | # [[Upload full tomogram|Create & Upload Tomogram]] |
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| 12 | 1 | Amber Herold | # [[Create tomogram subvolume|Create Tomogram Subvolume]] |
| 13 | 15 | Anchi Cheng | ** [[Average tomogram subvolumes|Average Subvolumes]] |
| 14 | 2 | Anke Mulder | |
| 15 | h2. Appion SideBar Snapshot: |
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| 17 | 20 | Alex Noble | !http://emg.nysbc.org/attachments/download/4669/Appion_Tomography_Sidebar.png! |
| 18 | 1 | Amber Herold | |
| 19 | |||
| 20 | 13 | Anke Mulder | h2. Notes, Comments, and Suggestions: |
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| 22 | !http://emg.nysbc.org/attachments/277/Picture_81.png! |
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| 23 | 2 | Anke Mulder | |
| 24 | |||
| 25 | 1 | Amber Herold | ______ |
| 26 | 2 | Anke Mulder | |
| 27 | 6 | Anke Mulder | [[CTF_Estimation|< CTF Estimation]] | [[Align tilt series|Align Tilt Series >]] |
| 28 | 2 | Anke Mulder | |
| 29 | ______ |