Useful shell commands » History » Revision 2
Revision 1 (Amber Herold, 08/02/2011 02:15 PM) → Revision 2/28 (Amber Herold, 09/23/2011 11:06 AM)
h1. Useful shell commands
h3. check the status of a job
# ssh to the processing server
# <pre>qstat -au YOUR_USER_NAME</pre>
# will list your jobs
h3. make a folder writable
<pre> chmod -R g+rw eman_recon14</pre>
h3. kill a process
# Log into the machine it is running on
<pre>ssh fly</pre>
# Look for processes with your user name
<pre>ps -ef |grep [your_username]</pre>
# Kill the process using the number in the first column after your username
<pre>kill [process id]</pre>
# If the process was a copy, remove the destination folder
<pre>rm [destination folder]</pre>
# list system stats
<pre>top</pre>
h2. Kill a job running through the job manager
* use *qdelete* <job number>