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Version300 » History » Version 5

Amber Herold, 02/10/2014 12:15 PM

1 1 Amber Herold 
h1. Version300
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Appion Version 3.0 includes the following changes:





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# CentOS 6 compatible - there are major changes to the web server and processing server to be compatible with newer versions of PHP and Python.





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# New features for Director Detector images including [[Direct_Detector_Frame_Processing|Frame Alignment]]





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# Added an automatic masking tool called EM Hole Finder. The EM Hole Finder software computes masks of carbon holes in electron micrographs and is available at https://github.com/hbradlow/em_hole_finder. 





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# Improved CTF reporting tools.





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# Support for varaible cs values between TEM's





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# Integrated contourpicker





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# Helical refinement tools





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# Added support for Automated common lines using angular reconstitution





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# Added xmipp ctf estimation





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# Incorporated John Rubinsteins Free-hand test scripts (Python only)





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# Added SIMPLE abinitio alignment and reconstruction





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# Newer version of ctffind3





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# Support for GPU version of FindEM





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# Added Multi-model SPARX/EMAN2 reconstruction





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# Added support for the [[Maskiton]] image masking tool