Gatan K2 installation and setup » History » Version 8
Anchi Cheng, 01/03/2014 03:31 PM
| 1 | 1 | Anchi Cheng | h1. Gatan K2 unique installation and setup |
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| 3 | 6 | Anchi Cheng | h2. Gatan K2 is controlled by a computer separated from the microscope |
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| 5 | Please read [[Using_Leginon_on_a_system_where_the_microscope_and_camera_are_controlled_by_different_computers]] first. |
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| 7 | 4 | Anchi Cheng | h2. Extra Package and Installation |
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| 9 | * Use all amd64 version of Windows installer |
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| 11 | 4 | Anchi Cheng | * "SerialEM DigitalMicrograph Plug-in":http://emg.nysbc.org/attachments/download/1817/SEMCCD-GMS2-64.dll |
| 12 | 1 | Anchi Cheng | {{include(Install_SerialEM_DigitalMicrograph_plugin)}} |
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| 14 | h2. instruments.cfg |
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| 16 | {{include(Gatan_K2_Instruments_cfg)}} |
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| 18 | 2 | Anchi Cheng | h2. Setup |
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| 20 | * Set camera configuration to 270 degree rotation and horizontal flip to give the [[Leginon Image Orientation|standard Leginon orientation]]. |
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| 21 | 8 | Anchi Cheng | * Set the [[Low_dose_shutter_configuration_for_Gatan_camera_in_Digital_Micrograph_program|shutter configuration in DM]] to protect the specimen when camera is not taking images. |
| 22 | 7 | Anchi Cheng | * Create the folder to store the dose fractionation raw frames. Default location is D:\\frames. |
| 23 | 2 | Anchi Cheng | * Setup [[DDD_raw_frame_file_transfer|raw frame file transfer]] from a network data server. |
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| 25 | 1 | Anchi Cheng | h2. Testing with pyscope |
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| 27 | 5 | Anchi Cheng | {{include(Gatan_K2_Installation_Pyscope_Test)}} |
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| 29 | 6 | Anchi Cheng | h2. Programs to open before Leginon Client: Digital Micrograph |
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| 31 | h2. See more about K2 implementation in [[Using_Gatan_K2_Summit_in_Leginon]] |