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Getting Started as a Super User » History » Revision 2

Revision 1 (Amber Herold, 04/27/2010 04:11 PM) → Revision 2/8 (Amber Herold, 04/27/2010 04:14 PM)

h1. Getting Started as a Super User 

 h2. Full (Super User) Manual - Getting Started 



 These steps are a general overview of the entire procedure involving 
 installation, microscope alignment, calibrations, and using Leginon applications (e.g. 
 Manual, Calibrations, MSI). 




 h3. 1. Download Leginon System 


 "http://www.leginon.org/":http://www.leginon.org/ 





 h3. 2. Install Leginon System 



 Refer to the <link linkend="completeinstall">Complete Installation</link> 





 h3. 3. Add Users, Groups, Instruments, Calibrations, and Applications 



 Refer to <link linkend="addusers">Administration</link> 


 For advanced Leginon users who would like to create an application, see the <link 
 linkend="createapp">application creation chapter</link>. 





 h3. 4. Test run 



 Refer to <link linkend="runleg_chapter">Start Leginon</link> chapter for test run on 
 the microscope and on a remote computer. 





 h3. 5. Align the microscope 



 Refer to <link linkend="microscope_setup">Microscope Set-up</link> 





 h3. 6. Calibrate Leginon for the microscope 



 Refer to the <link linkend="calapp_chapter">Calibrations chapter</link> 





 h3. 7. Set-up and Run MSI 



 Refer to <link linkend="MISQuickStart">MSI quick set-up checklist</link> 


 AND 


 Refer to <link linkend="leg1operation">MSI Operation</link> 





 h3. 8. Help yourself and others 



 Refer to <link linkend="Inst_troubleshooting">Installation Trouble Shooting</link>, 
 <link linkend="MSI_troubleshooting">User Trouble Shooting</link> and Leginon    "Bulletin Board":http://emg.nysbc.org/bb/viewforum.php?f=2 . 







 h3. 9. Know the details 



 For advanced Leginon users who would like to create an application, see the <link 
 linkend="createapp">application creation chapter</link>. 


 Refer to <link linkend="Nodes">Node Description</link> 





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 [[Getting Started as a System Administrator|Getting Started as a System Administrator >]] 

 




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