Leginon

h1. Summary of this application

h2. MSI-Edge uses a template matching of the Edge image for hole finding both in "Hole Targeting" and "Exposure Targeting".

See the previous chapter for general description of all MSI applications:

<link linkend="preleg1setup">Pre-MSI Set-up</link>: Prior to setting up Leginon for the day, make sure that Leginon has been previously set-up (this step is in case the ambitious user decides to proceed to this section for the first time and hasn't gone through all the calibrations...).

<link linkend="MSI_pref">MSI preference &amp; configuration</link>: The comprehensive MSI preferences and configuration example.

<link linkend="MISQuickStart">MSI Quick Start checklist</link>: A short check list for users who are familiar with the application and have saved preferences.

<link linkend="MSISetupDetails">MSI set-up in more details</link>: The more complicated MSI Leginon application set-up that should be completed before collecting data.

<link linkend="MSIQueue">MSI queuing option</link>: Introduction to the queuing option.

<link linkend="QExpTarget">MSI Exposure Target queuing</link>: The setup and operation of queuing mode for large number of exposure targets and/or for avoiding accessing sq presets after initial acquisition and targeting.

<link linkend="QHoleTarget">MSI Hole Target queuing</link>: The setup and operation of queuing mode recommanded for quick overall survey of rare hole targets in grid squares.

<link linkend="MSI_troubleshooting">MSI Trouble shooting</link>: This trouble shooting sections addresses some of the possible challenges a Leginon user may face while using the MSI application.