Electron Microscopy Group

06/16/2010

09:05 PM Appion Feature #197: Integrate tiltStackAlign.py into the pipeline

and rename to tiltStackSync to avoid ambiguity since tiltStackAlign sounds more like doing an alignment with tilted p... Ed Brignole

07:18 PM Appion Feature #493: Ed's iteration alignment

I just tested on amibox02 and it runs fine.
/home/brignole/ami_html/myami/appion/bin/edIterAlign.py \
--projecti... Ed Brignole

06/11/2010

04:20 PM Appion Feature #493 (In Test): Ed's iteration alignment

Problem was incompatibility of old spider scripts with new Spider18.
1) Deleted old spiderbatch directory, replace... Ed Brignole

04:14 PM TiltPicker Revision 14359: ref #493 updated edIter batch and subscripts for compatibility with Spider18

Ed Brignole

03:35 PM TiltPicker Revision 14353: refs #493

Updated to run new version of IterativeAlignClassify.spi Ed Brignole

06/10/2010

06:11 PM Appion Bug #653 (Won't Fix or Won't Do ): stack summary table has normalization backward

"Normalization: no" means that the stack was normalized. "Normalization: yes" means that it was not normalized. This ... Ed Brignole

06/09/2010

10:53 AM Appion Bug #641 (Closed): imageloader.py fails to upload images - a sinedon.cfg problem?

That fixed it. I just needed my sinedon.cfg to look exactly like Anchi's. Ed Brignole

06/07/2010

11:23 PM Appion Bug #641 (Closed): imageloader.py fails to upload images - a sinedon.cfg problem?

... Ed Brignole

05/25/2010

06:08 PM Appion Feature #493 (In Test): Ed's iteration alignment

Bin and last ring are set on web page. #freealigns changed to 1.
Changes to runEdIterAlignment.php were committed... Ed Brignole

05/24/2010

05:12 PM Appion Feature #493: Ed's iteration alignment

So then what do I do if it chokes while committing! see below:
Sending processing/runEdIterAlignment.php
A... Ed Brignole