Electron Microscopy Group

05/12/2014

01:24 PM Appion Bug #2771 (Closed): apCluster not running during OptiMod run

Thanks Sargis, it is working now.
Best,
Dipa Dipali Sashital

01:23 PM Appion Bug #2771: apCluster not running during OptiMod run

Thanks Sargis, it is working now.
Best,
Dipa Dipali Sashital

12:37 PM Appion Bug #2771 (Closed): apCluster not running during OptiMod run

Hi all,
I hope all is well with you! I am trying to run OptiMod on Goby, and running into some issues. Firstly, I ... Dipali Sashital

05/05/2014

11:41 AM Appion Bug #2756 (Closed): viewstack for particles within class not working on emportal

Great, looks like it's working now. Thanks Amber and Sargis!
-Dipa Dipali Sashital

07:48 AM Appion Bug #2756 (Closed): viewstack for particles within class not working on emportal

viewstack is working fine for most stacks, but when I query a specific class to view the raw or aligned particles, no... Dipali Sashital

04/04/2013

12:15 PM Appion Bug #2303: runXmippCL2D.py cannot generate average.mrc

After running 3 successful cl2d jobs, this average.mrc error has returned for me. I am requesting the maximum memory ... Dipali Sashital

03/31/2013

08:18 PM Appion Bug #2303: runXmippCL2D.py cannot generate average.mrc

Per Ryan's suggestion, I restarted my job requesting the maximum memory per node. The job seems to be running normall... Dipali Sashital

05:12 PM Appion Bug #2303 (New): runXmippCL2D.py cannot generate average.mrc

I had the same error on two cl2d runs that failed earlier today. They can be found in directories
/ami/data15/appi... Dipali Sashital

08/23/2012

12:29 PM Appion Bug #2011 (Closed): cl2d and xmipp issues

I tested both maxlike and cl2d and they both worked. Thanks so much for your help Sargis and Amber! Dipali Sashital

08/22/2012

10:19 AM Appion Bug #2011: cl2d and xmipp issues

I am getting a bit further than that with cl2d, but I'm still getting the error that it cannot create average.mrc aft... Dipali Sashital