Electron Microscopy Group

09/23/2022

03:22 PM Leginon Appion: RE: Issue viewing uploaded images

I've never had to install EMAN, this has always been taken care of by the IT folks. EMAN2 may be an option since it's... Gabriel Lander

09/22/2022

07:18 PM Leginon Appion: RE: Issue viewing uploaded images

I see. That's the issue then - your options are to install EMAN 1.9 on the machine that is performing the upload, or ... Gabriel Lander

05:13 PM Leginon Appion: RE: Issue viewing uploaded images

I believe EMAN1.9 is being used to convert anything that is not an mrc or tif formatted file. Can you try running the... Gabriel Lander

08/15/2019

04:11 PM Appion Feature #5146: Local CTF estimation with GCTF

Sped up local particle extraction with local values by binning the matrix of values. Gabriel Lander

08/14/2019

10:45 PM Appion Task #7941 (New): ctfreport.php needs to be sped up

The CTF summary page is very slow, this is an attempt to speed it up. We now run the "getBestCTFByResolution" query o... Gabriel Lander

07/17/2019

02:53 PM Appion Bug #7812: Download particle data takes too much memory

Does anyone use the helical picker? I don't think anyone does at this end. Gabriel Lander

08/15/2018

12:14 PM Appion Feature #5948 (New): customizable setup for launching jobs to workstations or clusters

Scott's tools for customizing appion job launch based on your institute's computing infrastructure Gabriel Lander

09:01 AM Appion Feature #5947 (New): single button launcher

launch multiple appion commands using hard-coded defaults directly from a single web page. Gabriel Lander

08:58 AM Appion Bug #4933 (Closed): non-square images not displaying in web browser

Gabriel Lander

01/25/2018

02:35 AM Appion Feature #5159: Check all sibling images for CTF info

CameraEMData['align frames'] is a better way to go for sure, if you're able to code that in then by all means please ... Gabriel Lander