Electron Microscopy Group

06/16/2022

11:05 AM Leginon Feature #12874 (New): Add aperture used in the image viewer data tree

Would like to enable tracking of the C2 and objective aperture used for data collection. Ed Eng

05/23/2019

07:56 PM Appion Feature #6839: Automate NCCAT reports

Have not fully shifted over to the report.
Currently testing the reports with recent sessions have encountered for... Ed Eng

04/18/2019

09:44 PM Appion Feature #6839: Automate NCCAT reports

In terms of the previous query the context is slightly different and the user would glean different information.
A... Ed Eng

03/15/2017

12:47 PM Appion Bug #4835 (Assigned): How does Appion supply the defocus value to CTF estimation programs?

User on the microscope has a preset set at -2 um for nominal defocus, but that is not the value that is provided to C... Ed Eng

03/10/2017

11:43 AM Leginon Bug #4794: Need more than 3 values to unpack error during data collection

2017/03/08
Occurred multiple times during session for rhite during alpha tilt. Ed Eng

02/28/2017

11:47 AM Leginon Bug #4794 (Closed): Need more than 3 values to unpack error during data collection

2017/02/28
Collecting at -30 degree tilt
Session: 17feb28b
Priyamvada encountered a few errors:
* preset reques... Ed Eng

04/27/2016

04:37 PM Appion Bug #4137 (Closed): Krios1 K2 references were not copied

Andrey reported that his references were not in the frames directory.
/gpfs/frames/16apr20e/rawdata/references/
T... Ed Eng

09/16/2015

03:50 PM Appion Bug #3566 (Closed): Error making substacks in Appion

User Yihu Xie having trouble making substacks in Appion.
Job completed in Appion, but did not show up. Tried in co... Ed Eng

08/24/2015

08:39 AM Appion Bug #3409 (Assigned): EMDB or PDB to Model not working

EMDB to Model does not seem to be working. I also am having errors with PDB to Model. Small pdbs are no problem, but... Ed Eng

05/19/2015

10:53 AM Leginon Bug #3223 (New): MF window in Manual application does not resize properly

When running the Manual (2.1) application, the MF window does not rescale to fill the window when changing the size o... Ed Eng