problem to run killtargets.py
Added by Anonymous almost 13 years ago
Hi,
I have problem in running the script killtargets.py and the error is
[vdandey@cina-hpws12 leginon]$ cd /usr/lib/python2.4/site-packages/leginon/
[vdandey@cina-hpws12 leginon]$ python killtargets.pyc 11nov29a
Traceback (most recent call last):
File "/usr/lib/python2.4/site-packages/leginon/killtargets.py", line 10, in ?
db = leginondata.db
AttributeError: 'module' object has no attribute 'db'
actually, I encountered deadlock problem only twice untill now during 6 sessions of full automated mode(around 8000 negative stain images). As per the documentation to avoid this problem, it says that to run killertargets.py as python script. since I have vague idea of python. how to solve this error or problem?
regards,
venkata
Replies (2)
RE: problem to run killtargets.py - Added by Anchi Cheng almost 13 years ago
Venkata,
No one at NRAMM or who we support recently need to use killtargets.py. The script is therefore out-of-date (broken for two years, maybe). I've updated it and committed to svn for 2.1 version. You can do an svn update of what you use for installation to get it. see issue #1494 for details on the bug and the changes I made.
If you can reproduce your deadlock problem, we would be interested in finding out what caused it if you can give us more details on it. Feel free to create a New Issue in redmine for it and assign it to Jim or me.
Anchi
RE: problem to run killtargets.py - Added by Anonymous almost 13 years ago
Dear Anchi,
Sorry for late reply, I was bit busy with image processing through Appion for my Images collected through leginon. The updated file worked well and marked all targets as done.
I have given my feedback and was unable to change the status to close.
venkata