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Bug #13334

open

redux not using fftw in python3

Added by Anchi Cheng over 2 years ago. Updated about 2 years ago.

Status:
Assigned
Priority:
Normal
Assignee:
Category:
-
Target version:
Start date:
08/19/2022
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 4.0
Show in known bugs:
No
Workaround:

redux default to use the slower fftpack if can not load fftw.


Description

redux in myami-python3 branch can currently only works with scipy.fftpack. It is slower, especially in comparison with wisdom in fftw on odd sizes like those from k3. Needs the python hook to fftw to be updated to use fftw3.

Please work on this in myami-python3-fftw branch

You can force redux to use fftw by commenting out the part it attempt fftpack in pyami/fft/registry.py


Files

test_fft.py (241 Bytes) test_fft.py Anchi Cheng, 08/24/2022 08:27 PM
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