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Bug #1824
open"cput" in cluster config file ignored by maxlikeAlignment.py
Status:
New
Priority:
Normal
Assignee:
-
Category:
-
Target version:
-
Start date:
05/25/2012
Due date:
% Done:
0%
Estimated time:
Affected Version:
Appion/Leginon 2.1.0
Show in known bugs:
No
Workaround:
Description
"cput" is coded into maxlikeAlignment.py at a constant 240 hours and config file in myamiweb/processing does not override this.
Also a more general comment on "cput" throughout appion: Should probably by set to at least number_of_processes X walltime, otherwise job gets cut off by cput long before walltime cutoff. For example, I just saw an example of maxlikeAlignment.py job getting killed after about 10 hours even though wall time was 240. Using 24 processors and cput=240 -> only takes about 10 hours before cput kills it.
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