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Bug #1842

closed

remove "allow frealign to determine ctf" from refine prep page

Added by Amber Herold over 12 years ago. Updated over 10 years ago.

Status:
Closed
Priority:
Normal
Assignee:
Amber Herold
Category:
Web interface
Target version:
Appion/Leginon 2.2.0
Start date:
06/07/2012
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.1.0
Show in known bugs:
No
Workaround:

Description

This is acieved in the run section by setting the amplitude contrast to a negative value

Related issues 1 (0 open — 1 closed)

Related to Appion - Bug #1831: --ctftilt= always show up in prepRefineForm.php for FrealignClosedAmber Herold06/01/2012

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 #1

Updated by Anchi Cheng about 12 years ago

Current Appion prepRefineFrealign.py will produce only black on white particle stack. This means that amplitude contrast must be set to positive. We will need to think this through with the new contrast entry in particle selection run.

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 #2

Updated by Amber Herold over 10 years ago

  • Status changed from Assigned to Closed
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