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Bug #1875

open

redux info reading error on png image

Added by Anchi Cheng over 12 years ago. Updated over 12 years ago.

Status:
In Code Review
Priority:
High
Assignee:
Jim Pulokas
Category:
Python scripting
Target version:
Appion/Leginon 3.0.0
Start date:
06/21/2012
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 3.0.0
Show in known bugs:
No
Workaround:

Description

REQUEST: filename=/ami/data00/appion/11nov28c/recon/xmipp_recon3/Xmipp_results/eulerPolar-5_1.png&info=1&oformat=JSON
IN MEMORY: Format(139736214036880,oformat=JSON,rgb=False)
REQUEST: pipeline=standard&filename=/ami/data00/appion/11nov28c/recon/xmipp_recon3/Xmipp_results/eulerPolar-5_1.png&rgb=1&shape=640x640&scaletype=stdev&scalemin=-3&scalemax=3&oformat=PNG
NOT IN MEMORY: Format(139736214038608,oformat=PNG,rgb=True)
NOT IN MEMORY: Scale(139736214039120,scalemax=3.0,scalemin=-3.0,scaletype=stdev)
NOT IN MEMORY: Shape(139736214037776,shape=(640, 640))
IN MEMORY: Read(139736214039568,filename=/ami/data00/appion/11nov28c/recon/xmipp_recon3/Xmipp_results/eulerPolar-5_1.png,info=False)
NOT IN FILE: Read(139736214039568,filename=/ami/data00/appion/11nov28c/recon/xmipp_recon3/Xmipp_results/eulerPolar-5_1.png,info=False)
Running Shape(139736214037776,shape=(640, 640))
1340314882.7
Traceback (most recent call last):
File "/usr/lib/python2.6/site-packages/redux/server.py", line 37, in run_process
result = pipeline.process(**kwargs)
File "/usr/lib/python2.6/site-packages/redux/pipeline.py", line 104, in process
result = pipe(result)
File "/usr/lib/python2.6/site-packages/redux/pipe.py", line 162, in call
return self.run(input, **self.kwargs)
File "/usr/lib/python2.6/site-packages/redux/pipes/shape.py", line 38, in run
if binfactor0 and binfactor1:
TypeError: 'NoneType' object is unsubscriptable

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