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Bug #2039

open

makestack2.py deletes .box files selectively

Added by Ryan Hoffman about 12 years ago. Updated about 12 years ago.

Status:
New
Priority:
Normal
Assignee:
Ryan Hoffman
Category:
-
Target version:
-
Start date:
09/10/2012
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.1.0
Show in known bugs:
No
Workaround:

None known.

Description

If an .mrc file is indexed below 100, i.e. session_0001ma_0.mrc, then makestack2.py leaves its .box file.

But if the micrograph is indexed over 99, i.e. session_0261ma_0.mrc, then its .box file gets deleted.

This behavior was confirmed by inputing two separate DoG-picker runs, each on a single micrograph (indexed 1 and 261), to makestack2.py. The .box files are needed for CTF correction on tilted images.

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