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Bug #2536

open

writeDoneDict error in parallel dd frame alignment run

Added by Anchi Cheng about 11 years ago.

Status:
New
Priority:
Normal
Assignee:
Dmitry Lyumkis
Category:
-
Target version:
-
Start date:
09/30/2013
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 3.0.0
Show in known bugs:
No
Workaround:

Description

Found this in Dmitry's log.

Save Sum to: tempnodea0609.0_sum.mrc
Done.
New image filename is: 13sep27a_gr1_00018gr_00016sq_v02_00023hl_00004ed-a ==== Committing data to database ====
... Uploading aligned image as 13sep27a_gr1_00018gr_00016sq_v02_00023hl_00004ed
Traceback (most recent call last):
File "/opt/applications/myami/trunk/bin/makeDDRawFrameStack.py", line 214, in <module>
makeStack.run()
File "/opt/applications/myami/trunk/lib/python2.6/site-packages/appionlib/appionLoop2.py", line 111, in run
self._writeDoneDict(imgdata['filename'])
File "/opt/applications/myami/trunk/lib/python2.6/site-packages/appionlib/appionLoop2.py", line 462, in _writeDoneDict
self.donedict = cPickle.load(f)
EOFError

Hope it does not affect the result.

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