Project

General

Profile

Actions

Feature #2729

closed

create a STAR format file reader/writer

Added by Amber Herold over 10 years ago. Updated almost 7 years ago.

Status:
Closed
Priority:
Normal
Category:
Python scripting
Target version:
Start date:
04/21/2014
Due date:
% Done:

0%

Estimated time:

Description

This is needed for the Relion refine upload step.
starFile.py is heavily commented, so read that for details.

Basically, this is an object oriented set of classes that can be used to read an existing star file. Star files each have at least one data block which can have labels with or without values and a loop section with labels of it's own and value set entries that relate to the labels. These labels and loops can be extracted as dictionaries.
This file can also be used for writing new star files.

Actions #1

Updated by Amber Herold over 10 years ago

  • Status changed from Assigned to In Code Review
  • Assignee changed from Amber Herold to Dmitry Lyumkis
Actions #2

Updated by Anchi Cheng almost 7 years ago

  • Status changed from In Code Review to Closed
  • Target version changed from Appion/Leginon Future Version to Appion/Leginon 3.1.0

has been working

Actions

Also available in: Atom PDF