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Bug #3656
openprepRefineFrealign.py does not convert stack properly
Status:
New
Priority:
Normal
Assignee:
-
Target version:
-
Start date:
10/13/2015
Due date:
% Done:
0%
Estimated time:
Description
Traceback (most recent call last):
File "/opt/myamisnap/bin/prepRefineFrealign.py", line 247, in <module>
app.start()
File "/opt/myamisnap/lib/appionlib/apPrepRefine.py", line 420, in start
self.__processStack(prepdata)
File "/opt/myamisnap/lib/appionlib/apPrepRefine.py", line 363, in __processStack
self.convertToRefineStack()
File "/opt/myamisnap/bin/prepRefineFrealign.py", line 189, in convertToRefineStack
xmipp_normtext = self.setArgText('xmipp-normalize',(paramdata['xmipp-norm'],),True)
File "/opt/myamisnap/lib/sinedon/data.py", line 517, in __getitem__
return self.special_getitem(key, dereference=True)
File "/opt/myamisnap/lib/sinedon/data.py", line 496, in special_getitem
value = super(Data, self).__getitem__(key)
KeyError: 'xmipp-norm'
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