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Feature #4014

open

StackClass: a class for reading and writing stacks that is file type agnostic

Added by Neil Voss over 8 years ago. Updated over 8 years ago.

Status:
Assigned
Priority:
Normal
Assignee:
Neil Voss
Category:
-
Target version:
-
Start date:
03/07/2016
Due date:
% Done:

0%

Estimated time:

Description

Connected to the apProc2d replacement we need a file type agnostic reading and writing stack tool. StackClass is this tool.

Related issues 2 (2 open — 0 closed)

Blocks Appion - Feature #2997: create an Appion alternative to EMAN1 proc2dAssignedNeil Voss12/15/2014

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Blocked by Appion - Bug #4382: Image flipping for IMAGIC format in apImagicFile.pyAssignedAnchi Cheng08/14/2016

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 #1

Updated by Neil Voss over 8 years ago

  • Blocks Feature #2997: create an Appion alternative to EMAN1 proc2d added
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 #2

Updated by Neil Voss over 8 years ago

Hi Gabe and Anchi,

With some late night inspiration, I implemented a completely reworked StackClass. It is much cleaner and smaller files than before.

One problem is that for some reason when writing to IMAGIC stacks the numbers written are different from those read, it must a be a old bug in apImagicFile.py that I have to track down.

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 #3

Updated by Neil Voss about 8 years ago

  • Blocked by Bug #4382: Image flipping for IMAGIC format in apImagicFile.py added
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