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Support #4215
openStack making
Status:
New
Priority:
Normal
Assignee:
-
Category:
-
Target version:
-
Start date:
05/26/2016
Due date:
% Done:
0%
Estimated time:
Affected Version:
Appion/Leginon 3.2
Description
Trying to make a stack and end up with this error. This is project:
http://192.168.4.37/betamyamiweb/processing/checkAppionJob.php?expId=1909&jobId=619
!!! DEBUG: printSummary set local count to stats totalcount=59
SUMMARY: makestack2
------------------------------------------
TIME: 51.63 msec
AVG TIME: 51.11 /- 7.03 msec
!!! DEBUG: printSummary adding to stats count
------------------------------------------
!!! WARNING: skipped total of 857 images.
... to process them again, remove 'continue' option and run makestack2 again.
!!! WARNING: files with the patterns '/gpfs/appion/bcarr/16apr10a/stacks/stack18/16apr10a*.dwn.mrc'
will be removed
... Removed of files
!!! WARNING: files with the patterns '/gpfs/appion/bcarr/16apr10a/stacks/stack18/16apr10a*m
... .mrc' will be removed
... Removed of files
... averaging stack for summary web page
!!! WARNING: could not create stack average, average.mrc
... creating Stack Mean Plot montage for stackid: 64
... Getting stack data for stackid=64
Old stack info: 'CTF conf. < 8.0'
... binning stack by 1
... possible virtual stack, searching for original stack
... Querying original particles from stackid=64
Traceback (most recent call last):
File "/opt/myamisnap/bin/makestack2.py", line 1216, in
makeStack.run()
File "/opt/myamisnap/lib/appionlib/appionLoop2.py", line 114, in run
self.postLoopFunctions()
File "/opt/myamisnap/bin/makestack2.py", line 1145, in postLoopFunctions
apStackMeanPlot.makeStackMeanPlot(stackid)
File "/opt/myamisnap/lib/appionlib/apStackMeanPlot.py", line 37, in makeStackMeanPlot
vstackdata = apStack.getVirtualStackParticlesFromId(stackid)
File "/opt/myamisnap/lib/appionlib/apStack.py", line 87, in getVirtualStackParticlesFromId
apDisplay.printError("Virtual stack: %i does not have original stack information")
File "/opt/myamisnap/lib/appionlib/apDisplay.py", line 65, in printError
raise Exception, colorString("\n * FATAL ERROR *\n"+text"\n\a","red")
Exception:
- FATAL ERROR ***
Virtual stack: %i does not have original stack information
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