Bug #4322: Upload RMAXLIKE alignment failed? - Appion - Electron Microscopy Group

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Bug #4322

closed

Upload RMAXLIKE alignment failed?

Added by Giovanna Scapin over 8 years ago. Updated almost 7 years ago.

Status:

Closed

Priority:

High

Assignee:

Category:

Target version:

Start date:

07/19/2016

Due date:

% Done:

Estimated time:

Affected Version:

Appion/Leginon 3.2

Show in known bugs:

Workaround:

Description

This is the end of the log file. The job was a RELION 2D alignment.

Traceback (most recent call last):
File "/opt/myamisnap/bin/uploadMaxlikeAlignment.py", line 639, in <module>
maxLike.start()
File "/opt/myamisnap/bin/uploadMaxlikeAlignment.py", line 606, in start
self.alignReferences(runparams)
File "/opt/myamisnap/bin/uploadMaxlikeAlignment.py", line 485, in alignReferences
if runparams['mirror'] is True:
KeyError: 'mirror'

Thanks - Giovanna

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