Project

General

Profile

Actions

Feature #4564

closed

Default changes on running average options for MotionCo2 vs motioncorr

Added by Anchi Cheng about 8 years ago. Updated almost 7 years ago.

Status:
Closed
Priority:
Normal
Assignee:
Category:
-
Target version:
Start date:
11/04/2016
Due date:
% Done:

0%

Estimated time:

Description

The Purdue modificated motioncorr v2.0 nrw option used standard in Appion is very useful in reducing noise trajectory in frame shift estimation. This is typically set to 3.

Similar feature is also found in MotionCor2 distributed from UCSF called Group. However, experiences told us it does not behave properly at any number other than 1.

Here is an example graph where Group is set to 3. The blue solid dot marks the first frame of the movie.

Therefore, we will default the two programs differently and validate the value for MotionCor2 implementation until the issue is fixed.


Files

MotionCor2Group3.png (29.6 KB) MotionCor2Group3.png Anchi Cheng, 11/04/2016 01:20 PM
Actions

Also available in: Atom PDF