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Bug #485

closed

makestack failing on ctf correciton?

Added by Bridget Carragher over 14 years ago. Updated over 14 years ago.

Status:
Closed
Priority:
Normal
Assignee:
Bridget Carragher
Category:
-
Target version:
Appion/Leginon 2.0.0
Start date:
05/15/2010
Due date:
% Done:

100%

Estimated time:
Affected Version:
Show in known bugs:
Workaround:

Description

trying to make a stack and get failure as:

makeStack.run()
File "/var/tmp/appion-2.0-5_rc1-root/opt/appion/appionlib/appionLoop2.py", line 70, in run
File "/var/tmp/appion-2.0-5_rc1-root/opt/appion/appionlib/appionLoop2.py", line 116, in loopProcessImage

File "/opt/appion/bin/makestack2.py", line 983, in processImage
self.boxedpartdatas, self.imgstackfile, self.partmeantree = self.boxParticlesFromImage(imgdata)
File "/opt/appion/bin/makestack2.py", line 227, in boxParticlesFromImage
imgpath = self.phaseFlipAceTwo(imgpath, imgdata)
File "/opt/appion/bin/makestack2.py", line 496, in phaseFlipAceTwo
cs = bestctfvalue['acerun']['ctftilt_params']['cs']/1000
TypeError: unsubscriptable object

Might be due to ctf problems but thought I had run this correctly?

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