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Bug #487

closed

map pop up in imageviewers measures image distance in nm and that of power spectrum in the same

Added by Anchi Cheng over 14 years ago. Updated over 14 years ago.

Status:
Closed
Priority:
Normal
Assignee:
-
Category:
-
Target version:
Start date:
05/16/2010
Due date:
% Done:

100%

Estimated time:
Affected Version:
Show in known bugs:
Workaround:

Description

For real space image, it should be in angstrum now that everywhere else is in angstrum. For Fourier space, the distance should be in resolution ( larger pixel distance the smaller the number).

Actions #1

Updated by Anchi Cheng over 14 years ago

  • Status changed from Assigned to In Code Review
  • Assignee changed from Anchi Cheng to Eric Hou
  • % Done changed from 0 to 100

Fix this with r13956.

To test:

1. Find an image with pixelsize and particle size known. For example, 10apr29b_00028gr_00090sq_v04_00024hl_00004ea.mrc pixelsize is 1.66 Angstrum, and GroEL top view diameter in there is ~150 A.
2. Click on the image to show the map.
3. Click on the ruler tool and click on the two ends of a top-view disk-like GroEL particle. The measured distance should show ~ 150 A.
4. In the viewer activate FFT display and click on it to show its map.
5. Click on the ruler tool and measure the x-axis resolution limit by clicking on the center of the FFT (power spectrum) image as the first point and the left-edge at the same horizontal line ( i.e. only move in x not y). The measured result should show 2 * 1.66 Angstrum.
6. Click on two points that has a smaller distance, the resolution measured should have a larger number than 2 * 1.66 Angstrum.

Actions #2

Updated by Eric Hou over 14 years ago

  • Status changed from In Code Review to In Test
  • Assignee changed from Eric Hou to Amber Herold

Code looks ok to me.

Actions #3

Updated by Amber Herold over 14 years ago

  • Assignee changed from Amber Herold to Anke Mulder

Anke, could you test this?

Actions #4

Updated by Neil Voss over 14 years ago

  • Status changed from In Test to Closed
  • Assignee deleted (Anke Mulder)

I tested it and it works.

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