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Bug #533

open

Download map from EMDB does not work for certain model

Added by Pick-Wei Lau over 14 years ago. Updated over 14 years ago.

Status:
In Test
Priority:
Normal
Assignee:
Pick-Wei Lau
Category:
Python scripting
Target version:
Appion/Leginon 2.0.0
Start date:
05/21/2010
Due date:
% Done:

100%

Estimated time:
Affected Version:
Appion/Leginon 2.0.1
Show in known bugs:
No
Workaround:

Description

I tried downloading different models:

My dicer model EMD-1646 gave this error

... retrieving emdb XML file: ftp://ftp.ebi.ac.uk/pub/databases/emdb/structures/EMD-1646/header/emd-1646.xml

Traceback (most recent call last):
File "/opt/appion/bin/modelFromEMDB.py", line 207, in ?
emdbmodel.start()
File "/opt/appion/bin/modelFromEMDB.py", line 179, in start
self.getXMLInfoFromEMDB(self.params['emdbid'])
File "/opt/appion/bin/modelFromEMDB.py", line 98, in getXMLInfoFromEMDB
apDisplay.printMsg("file has a pixel size of .3f A/pix"(apix))
UnboundLocalError: local variable 'apix' referenced before assignment

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